Erratum to: Taxonomic structure and functional association of foxtail millet root microbiome

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Taxonomic structure and functional association of foxtail millet root microbiome.

The root microbes play pivotal roles in plant productivity, nutrient uptakes, and disease resistance. The root microbial community structure has been extensively investigated by 16S/18S/ITS amplicons and metagenomic sequencing in crops and model plants. However, the functional associations between root microbes and host plant growth are poorly understood. This work investigates the root bacteri...

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Genetic structure of landraces in foxtail millet (Setaria italica (L.) P. Beauv.) revealed with transposon display and interpretation to crop evolution of foxtail millet.

Although the origin and domestication process of foxtail millet (Setaria italica subsp. italica (L.) P. Beauv.) has been studied by several groups, the issue is still ambiguous. It is essential to resolve this issue by studying a large number of accessions with sufficient markers covering the entire genome. Genetic structures were analyzed by transposon display (TD) using 425 accessions of foxt...

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Update on the Foxtail Millet System Foxtail Millet: A Sequence-Driven Grass Model System

Foxtail millet (Setaria italica) is a small diploid C4 panicoid crop species, whose genome is being sequenced by the Joint Genome Institute (JGI) of the Department of Energy. The rationale for sequencing foxtail millet is that it is closely related to the bioenergy grasses switchgrass (Panicum virgatum), napiergrass (Pennisetum purpureum), and pearl millet (Pennisetum glaucum), yet is a more tr...

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Population Genetics and Structure of a Global Foxtail Millet Germplasm Collection

Hari D. Upadhyaya, Mani Vetriventhan, Santosh P. Deshpande, and Selvanayagam Sivasubramani, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru 502 324, Telangana, India; Hari D. Upadhyaya, Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA, and Institute of Agriculture, University of Western Australia, Crawley, WA 6009, Australia; C. To...

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Genetic Diversity and Population Structure of Chinese Foxtail Millet [Setaria italica (L.) Beauv.] Landraces

As an ancient cereal of great importance for dryland agriculture even today, foxtail millet (Setaria italica) is fast becoming a new plant genomic model crop. A genotypic analysis of 250 foxtail millet landraces, which represent 1% of foxtail millet germplasm kept in the Chinese National Gene Bank (CNGB), was conducted with 77 SSRs covering the foxtail millet genome. A high degree of molecular ...

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ژورنال

عنوان ژورنال: GigaScience

سال: 2018

ISSN: 2047-217X

DOI: 10.1093/gigascience/giy099